SCI Publications

2006

O. Alter. “Discovery of Principles of Nature from Mathematical Modeling of DNA Microarray Data,” In Proceedings of the National Academy of Sciences, Vol. 103, No. 44, Proceedings of the National Academy of Sciences, pp. 16063--16064. October, 2006.
DOI: 10.1073/pnas.0607650103

O. Alter, G. H. Golub. “Singular Value Decomposition of Genome-Scale mRNA Lengths Distribution Reveals Asymmetry in RNA Gel Electrophoresis Band Broadening,” In Proceedings of the National Academy of Sciences, Vol. 103, No. 32, Proceedings of the National Academy of Sciences, pp. 11828--11833. July, 2006.
DOI: 10.1073/pnas.0604756103

E.W. Anderson, S.P. Callahan, G.T.Y. Chen, J. Freire, E. Santos, C.E. Scheidegger, C.T. Silva, H.T. Vo. “Visualization in Radiation Oncology: Towards Replacing the Laboratory Notebook,” SCI Institute Technical Report, No. UUSCI-2006-017, University of Utah, 2006.

A.E. Anderson, B.J. Ellis, J.A. Weiss. “Verification, Validation and Sensitivity Studies in Computational Biomechanics,” In Computer Methods in Biomechanics and Biomedical Engineering, pp. (in press). 2006.

R. Armstrong, G. Kumfert, L.C. McInnes, S.G. Parker, B. Allan, M. Sottile, T. Epperly, T. Dahlgren. “The CCA Component Model for High-Performance Scientific Computing,” In Concurrency and Computation: Practice & Experience, Vol. 18, No. 2, John Wiley and Sons Ltd., Chichester, UK pp. 215--229. 2006.
ISSN: 1532-0626

G.A. Ateshian, B.J. Ellis, J.A. Weiss. “Equivalence Between Instantaneous Biphasic and Incompressible Elastic Material Response,” In Journal of Biomechanical Engineering, pp. (in press). November, 2006.

L. Atty, N. Holzschuch, M. Lapierre, J.-M. Hasenfratz, C.D. Hansen, F.X. Sillion. “Soft Shadow Maps: Efficient Sampling of Light Source Visibility,” In Computer Graphics Forum, Vol. 25, No. 4, pp. 725--741. 2006.

S.P. Awate, T. Tasdizen, N. Foster, R.T. Whitaker. “Adaptive, Nonparametric Markov Modeling for Unsupervised, MRI Brain-Tissue Classification,” SCI Institute Technical Report, No. UUSCI-2006-008, University of Utah, 2006.

S.P. Awate, T. Tasdizen, R.T. Whitaker. “Unsupervised Texture Segmentation with Nonparametric Neighborhood Statistics,” In Proceedings of The European Conference on Computer Vision (ECCV) 2006 Springer, Lecture Notes in Computer Science, pp. 494--507. 2006.

S.P. Awate, T. Tasdizen, R.T. Whitaker. “Unsupervised Texture Segmentation with Nonparametric Neighborhood Statistics,” SCI Institute Technical Report, No. UUSCI-2006-011, University of Utah, 2006.

S.P. Awate, R.T. Whitaker. “Unsupervised, Information-Theoretic, Adaptive Image Filtering for Image Restoration,” In IEEE Trans. Pattern Anal. & Mach. Intel., Vol. 28, No. 3, pp. 364--376. March, 2006.
PubMed ID: 16526423

S.P. Awate, R.T. Whitaker. “Adaptive Markov Models for Information-Theoretic Empirical-Bayesian MRI Denoising,” SCI Institute Technical Report, No. UUSCI-2006-030, University of Utah, 2006.

S.P. Awate. “Adaptive, Nonparametric Markov Models and Information-Theoretic Methods for Image Restoration and Segmentation,” Note: PhD Thesis, School of Computing, University of Utah, December, 2006.

S.P. Awate, E.V.R. DiBella, T. Tasdizen, R.T. Whitaker. “Model-Based Image Reconstruction for Dynamic Cardiac Perfusion MRI from Sparse Data,” In Proceedings of the 2006 IEEE Int. Conf. Engineering and Biology Society (EMBC), pp. 936--941. 2006.

S.P. Awate, T. Tasdizen, N.L. Foster, R.T. Whitaker. “Adaptive, Nonparametric Markov Modeling for Unsupervised, MRI Brain-Tissue Classification,” In Medical Image Analysis (MEDIA), Vol. 10, No. 5, pp. 726--739. 2006.

L. Barbosa, J. Freire. “Automatically Constructing Collections of Online Databases,” In Proceedings of the 15th ACM International Conference on Information and Knowledge Management (CIKM), Arlington, pp. 796--797. 2006.

S. Basu, P.T. Fletcher, R.T. Whitaker. “Rician Noise Removal in Diffusion Tensor MRI,” In Medical Image Computing and Computer Assisted Intervention (MICCAI), Vol. LNCS 4190, pp. 117--125. October, 2006.

L. Bavoil, S.P. Callahan, C.T. Silva. “Robust Soft Shadow Mapping with Depth Peeling,” SCI Institute Technical Report, No. UUSCI-2006-028, University of Utah, 2006.

L. Bavoil, S.P. Callahan, A. Lefohn, J.L.D. Comba, C.T. Silva. “Multi-Fragment Effects on the GPU using the k-Buffer,” SCI Institute Technical Report, No. UUSCI-2006-032, University of Utah, 2006.

“Advances in Visual Computing, Second International Symposium, ISVC 2006, Lake Tahoe, NV, USA, November 6-8, 2006 Proceedings, Part I,” In ISVC (1), Lecture Notes in Computer Science, Vol. 4291, Edited by George Bebis and Richard Boyle and Bahram Parvin and Darko Koracin and Paolo Remagnino and Ara V. Nefian and Meenakshisundaram Gopi and Valerio Pascucci and Jiri Zara and Jose Molineros and Holger Theisel and Thomas Malzbender, Springer, 2006.
ISBN: 3-540-48628-3